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Showing posts with label science. Show all posts
Showing posts with label science. Show all posts

Saturday, May 07, 2011

Lavoisier: Chemist, Biologist, Economist

Lavoisier

Recently I read Vivian Grey’s biography of Lavoisier. Although a fine book, it left me wanting more Lavoisier, so I turned to Jean-Pierre Poirier’s more substantial biography: “Lavoisier: Chemist, Biologist, Economist”. Related is my blog post on the French Académie des Sciences, of which Lavoisier was a long term member, and senior, member.

This is a much longer, denser book than that of Grey, with commonality of subject it’s unsurprising that the areas covered are similar. However, Poirier spends relatively more time discussing Lavoisier’s activities as a senior civil servant and as an economist.

The striking thing is the collection of roles that Lavoisier had: senior member of Ferme Générale (commissioned Paris wall), director of the Académie, director of the Gunpowder and Saltpeter Administration, owner and manager of his own (agricultural) farms. It’s difficult to imagine a modern equivalent, the governor of the Bank of England running a research lab? Or perhaps an MP with a minor ministerial post, running a business and a research lab? In practical terms he did experimental work for a few hours each morning and evening (6-9am, 7-10pm) and on Saturdays - having a number of assistants working with him. 

Lavoisier was wealthy, inheriting $1.8million* from relatives as an 11 year old he joined the Ferme Générale with an initial downpayment of about $3million. However, this provided an income of something like $2.4-4.8 million a year. On a trip to Strasbourg as a 24 year old, he spent $20,000 on books – which you have to respect. As the collector of taxes levied on the majority but not the nobility or clergy, the Ferme Générale was one of the institutions in the firing line when the Revolution came. Wealthy financiers, such as Lavoisier, bought stakes in these private companies, provided exclusive rights by the King, and made enormous rates of return (15-20%), at the same time serving the Kings needs rather poorly.

As for his activities in chemistry, Poirier provides a a good background to the developments going on at the time. Beyond what I have read before, it’s clear that Lavoisier does not make any of the first discoveries of for example, oxygen, carbon dioxide or nitrogen, nor of the understanding that combustion results in weight gain. But what he does do is build a coherent theory that brings all of these things together and overthrows the phlogiston theory of combustion. With Guyton de Morveau he develops a new, systematic, way of naming chemicals which is still used today and, as a side effect, embeds his ideas about combustion. It’s from this work that the first list of elements is produced. Furthermore, Lavoisier sees the applications of the idea of oxidation in explaining “chemical combustion” as entirely appropriate for understanding “biological combustion” or respiration. In a sense he sets the scheme for biochemistry which does not come to life for nearly 100 years, for want of better experimental methodology.

It’s interesting that gases are arguably the most difficult materials to work with yet it is their study, in particular understanding the components of air, which leads to an understanding of elements, and the “new chemistry”. Perhaps this is because gases are their own abstraction, there is nothing to see only things to measure.

The book also gives a useful insight into the French Revolution for someone who would not read the history for its own sake. The heart of the Revolution was a taxation system that exempted the nobility and the clergy from paying anything, and a large state debt from supporting the American War of Independence. Spending appears to have been decided by the nobility, or even just the King, with little regard as to how the money was raised. At one point Paris considered an aqueduct to bring in fresh water to all its citizens, but then decided that rebuilding the opera house was more important! The Revolution was a rather more drawn out than I appreciated with Lavoisier at the heart of the ongoing transformation at the time of his execution during the Terror, only to be lauded once again a couple of years later as Robbespierre fell from power and was executed in his turn.

On economics: Lavoisier was one of the directors of the French Discount Bank, during the Revolution he was involved in plans for a constitutional monarchy and amongst the ideas he brought forward was for what would essentially be an “Office for National Statistics”. The aim being to collect data on production and so forth across the economy in support of economic policy. This fits in with the mineral survey work he carried at the very beginning of his career and also on his work in “experimental farming”. Economic policy at the time alternating between protectionism (no wheat exports) and free-markets (wheat exports allowed), with many arguing that agriculture was the only economically productive activity.

It’s tempting to see Lavoisier’s scientific and economic programmes being linked via the idea of accounting: in chemistry the counting of amounts of material into and out of a reaction and in economics counting the cash into and out of the economy. 

Definitely a book I would recommend! It’s remarkable just how busy Lavoisier was in a range of areas, and the book also provides a handy insight into the French Revolution for those more interested in science. I wondering whether Benjamin Franklin should be my next target.

Footnote 

*These are equivalences to 1996 dollars, provided in the book, they should be treated with caution.

Saturday, April 23, 2011

The naming of things

This post is a response to one of the points Rebekah Higgit makes over at “Whewell’s Ghost” on “Dos and Don’ts of history of science”. It’s all about scientists:

1) Do not ever call anyone a scientist who would not have recognised the term. The word was not coined until the 1830s (by William Whewell himself) but a) he meant something rather different by it and b) the word was not actually used until the 1870s. If we use the term to describe anyone before this date we risk loading their views, status, career, ambitions and work with associations that just do not exist before this date.I may know what I mean if it slips out in my description of an 18th-century astronomy, but the person listening to me will hear all sorts of other things. It too easily glides over points such as the fact that individuals probably did something else to make their living, or were personally wealthy. Science was not a career, or a vocation. I could give many further examples, and expand this rule into to using actors’ categories elsewhere, but this is the fundamental point. Not only did the word not, essentially, exist pre-1870 but there was no equivalent and no such idea. Awkward as it can sometimes be, man of science, natural philosopher, mathematician, astronomer, physician, naturalist or whatever should always be used instead.

I disagree with this. I should point out that I don’t consider this a Marmite* argument: the point Rebekah makes is not unreasonable and arguing serves to reinforce the point she is making. That the lives of “scientists” in the past were very different from the lives of most modern “scientists” is an entirely fair point, and is perhaps what the history of science is all about.

Since Rebekah is a professional historian of science, I feel my best approach is to argue this point on linguistic and scientific grounds, since I am a scientist not a historian. The OED says a scientist is:

  1. A person with expert knowledge of a science; a person using scientific methods.

it goes on to describe its coining via almost joking discussions over the British Association for the Advancement of Science in 1834 to Whewell’s use in 1840.

Precluding the use of the word “scientist” from application to people living before it was introduced seems to rather limit our options – how far must this sanitisation of language extend? Our use of words evolves in time. There are parallels here with Maxwell’s equations: in the mathematical language of his time his equations were clumsy and verbose, in more modern notation they are much more compact (and to overuse a word “elegant”). Working scientists don’t use Maxwell’s original notation, they use the modern notation because it captures the essential elements of the original work but is easier to use.

In my view the heart of the issue is the way in which we define scientists, to me being a scientist is defined operationally: by what I do in applying the scientific method, and by inference what people did in the past. Rather than socially or economically: what I have been trained to do or what people would pay me to do. I would still be a scientist if I were not paid for it, and hadn’t been trained. In both cases I might be poorer, but in different senses of the word!

There is also a point about communication here too: using a word for which you and your colleagues hold a specialist, narrow meaning may be “correct” but not help with communication. Knowing that your definition and the definition your audience hold is different is important but does not mean you should hold your definition sacrosanct – I face the same issue communicating my specialist area of science.

Perhaps the issue here is that Rebekah takes scientist to mean “modern professional scientist” whilst my definition is more catholic.

This does lead to the question: should I describe myself as a historian?

*Appropriate here since I work for the company that makes Marmite.

Saturday, April 09, 2011

Book Review: The Chemist Who Lost His Head

Portrait_of_Antoine-Laurent_Lavoisier_and_his_wife
Following on from “The Measure of All Things” my interest in Antoine Lavoisier was roused, so I went off to get a biography: “The Chemist who lost his head: The Story of Antoine Laurent Lavoisier” by Vivian Grey. This turns out to be a slim volume for the younger reader, in fact my copy appears to arrive via the Jenks East Middle School in Tulsa. As a consequence I’ve read it’s 100 or so pages in under 24 hours - that said it seems to me a fine introduction.
Antoine Lavoisier lived 1743-1794. He came from a bourgeoisie family, the son of a lawyer, and originally training as a lawyer. Subsequently he took up an education in a range of sciences. As a young man, in 1768, he bought into the Ferme Générale which was to provide him with a good income but led to his demise during the French Revolution. The Ferme Générale was the system by which the French government collected tax, essentially outsourcing the process to a private company. Taxes were collected from the so-called “Third Estate”, those who were not landed gentry or clergy. Grey indicates that Lavoisier was a benign influence at the Ferme Generale, introducing a system of pensions for farmers and doing research into improved farming methods. Through the company he met his future wife, Marie Anne Pierrette Paulz, daughter to the director of the Ferme – Antoine and Marie married in 1771 when she was 14 and he 28. 
Lavoisier started his scientific career with a geological survey of France, which he conducted as an assistant to Jean Etienne Guettard between 1763 and 1767. This work was to be terminated by the King, but was completed by Guettard with Antoine Grimoald Monnet although Lavoisier was not credited. There seems to be some parallel here with William Smith’s geological map of the UK produced in 1815.
Through his geological activities Lavoisier became familiar with the mineral gypsum, found in abundance around Paris. He undertook a detailed study of gypsum which sets the theme for his future chemical research: making careful measurements of the weight of material before and after heating or exposure to water. He discovered that gypsum is hydrated: when heated it gives off water, when the dehydrated powder (now called plaster of Paris) is re-hydrated it forms a hard plaster. He wrote this work up and presented it to the Académie des Sciences – the French equivalent of the Royal Society, on which I have written repeatedly.
He was to present several papers to the Académie before being elected a member of this very elite group at the age of twenty-five, half the age of the next youngest member. Once a member he contributed to many committees advising on things such as street lighting, fire hydrants and other areas of civic interest, the Académie was directly funded by the King and more explicitly tasked with advising the government than the Royal Society was. Lavoisier was also involved in the foundation of the new metric system of measurement, which was the subject of “The Measure of All Things”. Lavoisier became one of four commissioners of gunpowder – an important role at the time. During his life he would have had contact with Joseph Banks – a long term president of the Royal Society, and also Benjamin Franklin – scientist and also United States Ambassador to France.
From a purely scientific point of view Lavoisier is best known for his work in chemistry: his approach of stoichiometry – the precise measurement of the mass of reactants in chemical reactions led to his theory of combustion which ultimately replaced the phlogiston theory. It is this replacement of phlogiston theory with the idea of oxidization that forms the foundation of Kuhn’s “paradigm shift” idea, so Lavoisier has a lot to answer for! 
The portrait of Antoine and Marie Laviosier at the top of the page is by Jacques-Louis David painted ca. 1788. It strikes me as quite an intimate portrait with Marie pressed against Antoine, looking directly at the viewer whilst her husband looks at her. Marie played a significant part in the work of Lavoisier, as well as recording experiments and drawing apparatus (something that takes good understanding to do well), and assisting with correspondence and translation  she was also responsible for publishing Mémoires de Chimie after his death. She was a skilled scientist in her own right. The equipment on the table and floor can be identified: on the floor is a portable hydrometer and a glass vessel for weighing gases. On the table are a mercury gasometer, and a glass vessel container mercury – likely illustrating the properties of oxygen and nitrogen in air. 
Antoine Lavoisier was executed in 1794, for his part in the Ferme Générale. His execution is attributed, at least in part to the ire of Jean-Paul Marat, who Lavoisier had earlier blocked from membership of the Académie des Sciences. It seems Lavoisier had been warned by friends that his life was in danger but appeared to think his membership of the Académie des Sciences would protect him. Ironically Jacques-Louis David also painted “The Death of Marat”.
100 pages on Lavoisier was not enough for me, I’m going for “Lavoisier” by Jean-Pierre Poirier next – some fraction of which appears to be available online, but I’m going for a paper copy. 

Thursday, March 31, 2011

Book review: The Measure of All Things

TheMeasureOfAllThingsThe Measure of All Things“ by Ken Alder tells the story of Pierre Méchain and Jean Baptiste Joseph Delambre’s efforts to survey the line of constant longitude (or meridian) between Dunkerque and Barcelona through Paris, starting amidst the French Revolution in 1792.

The survey of the meridian was part of a scheme to introduce a new, unified system of measures. The idea was to fix the length of the new unit, the metre, as 1/10,000,000th of the distance between the North Pole and the equator on a meridian passing through Paris.

At the time France used an estimated 250,000 different measures across the country with each parish having it’s own (uncalibrated) weights and measures with different measures for different types of material i.e. a “yard” of cotton was different from a “yard” of silk, and different if you were buying wholesale or selling to end users. These measures had evolved over time to suit local needs, but acted to supress trade between communities. Most nations found themselves in a similar situation.

Although the process of measuring the meridian started under the ancien regime, it continued in revolutionary France as a scheme that united the country. The names associated with the scheme: Laplace, Legrendre, Lavoisier, Cassini, Condorcet, leading lights of the Academie des Sciences, are still well known to scientists today.

Such surveying measurements are made by triangulation, a strip of triangles is surveyed along the line of interest. This involves precisely measuring the angles between each each vertex of the triangles in succession: given the three angles of a triangle and the length of one side of the triangle the lengths of the other two sides can be calculated. It’s actually only necessary to measure the length of one side on one triangle on the ground. Once you’ve done that you can use the previously determined lengths for successive triangles. All of France had been surveyed under the direction of César-François Cassini in 1740-80, the meridian survey used a subset of these sites measured at higher precision thanks to the newly invented Borda repeating circle. As well as this triangulation survey a measure of latitude was made at points along the meridian by examining the stars.
The book captures well the feeling of experimental measurement: the obsession with getting things to match up via different routes; the sick feeling when you realise you’ve made a mistake perhaps never to be reversed; the frustration at staring at pages of scribbles trying to find the mistake; the pleasure in things adding up.

Méchain and Delambre split up to measure the meridian in two sections: Delambre taking the northern section from Dunkerque to Rodez and Méchain the section from Rodez to Barcelona. Méchain delayed endlessly throughout the project, trusting little measurement to his accompanying team. Early on in the process, at Barcelona, he believed he had made a terrible error in measurement, but was unable to check whilst Spain and France were at war. He was wracked by doubt for the following years, only handing over doctored notes with great reluctance at the very end of the project. He was to die not long after the initial measurements were completed, leaving his original notes for Delambre to sift through.

At the time the measurements were originally made the understanding of experimental uncertainty, precision and accuracy were poorly developed. Driven in part by the meridian project and similar survey work by Gauss in Germany, statistical methods for handling experimental error more rigorously were developed not long afterwards. I wrote a little about this back here. Satellite surveying methods show that the error in the measurement by Méchain and Delambre is equivalent to 0.2 millimetres in a metre or 0.02%.

In the end the Earth turns out not to be a great object on which to base a measurement system: although it’s pretty uniform it isn’t really uniform and this limits the accuracy of your units. The alternative proposed at the time was to base the metre on a pendulum: it was to have the length necessary to produce a pendulum of period 2 seconds. This is also ultimately based on properties of the Earth since the second was defined as a certain fraction of the day (the time the Earth takes to rotate on its axis) and the local gravity which varies slightly from place to place, as Maskelyne demonstrated

Following the Revolution, France adopted, for a short time, a decimal system of time as well as metric units but these soon lapsed. However, the new metric units were taken up across the world over the following years - often this was during unification following war and upheaval.

The definition of the basic units used in science is still an active area. The definition of the metre has not relied on a unique physical object since 1960, rather it is defined by a process: the distance light travels in a small moment of time. However, the kilogram is still defined by a physical object but this may end soon with some exquisitely crafted silicon spheres.

I must admit to being a bit wary of this book in the first instance, how interesting can it be to measure the length of a line? However, it turns out I like to read history through the medium of science and the book provides an insight into France at the Revolution. Furthermore measuring the length of a line is interesting, or it is to a physicist like me.

Thanks to @beckyfh for recommending it!

Footnotes
1. The full-text of the three volume “Base du système métrique décimal" written by Delambre is available online. The back of the second volume contains summary tables of all the triangles and a diagram showing their locations.
2. The author’s website.
3. Some locations in Google Maps.

Tuesday, March 08, 2011

Book review: Doomsday Men by P.D. Smith

DoomsdayMenMy next book review is on Doomsday Men: The Real Dr Strangelove and the Dream of the Superweapon by P.D. Smith. I arrived at this book via the comments on my earlier post about the Manhattan Project, the Allied project to develop the atomic bombs dropped on Hiroshima and Nagasaki at the end of the Second World War. I also wrote about science fiction, which is relevant to this book too.

Doomsday Men brings context to the Manhattan Project, it shows the early imagining of what radioactivity could bring in terms of weapons of war, it shows science fiction writers foreseeing the applications, politicians considering the practical use of weapons of mass destruction and scientists working towards them. Alongside atomic weapons the potential for war from the air had been well considered before it was implemented.

The book starts with the conception of a genuine doomsday superweapon, that’s to say one that would wipe out all life on earth. This had been a theme of science fiction in the past, but in the early 1950’s it became plausible. Essentially the trick is to set off a fusion explosion in the presence of a large quantity of a particular element, cobalt, which would pick up neutrons becoming intensely radioactive whilst being vapourised and cast up into the atmosphere to settle the world over providing a lethal dose of radiation. The amount of cobalt required is about 10,000 tonnes which is only a cube with sides 10 metres long. There’s an open question as to whether the dust would be distributed uniformly enough to wipe out all life.

Leo Szilard is a central character through the book, along with fellow Hungarians John Von Neumann, Eugene Wigner and Edward Teller, known collectively as the Hungarian Quartet. They arrived in the US, fleeing anti-Semitism in Europe and were to play an important part in the development of nuclear weapons. It’s very striking the number of European Jews who migrated to the US in the period after the First World War, including Albert Einstein and Enrico Fermi. In the first instance many of them were keen to help in the development of nuclear weapons as a response to Hitler’s rise in Germany: a state they believed had both the technical ability to make such weapons and, with Hitler, the will to use them in war. Towards the end of the Second World War many of them felt less enthusiastic about their use against the Japanese, despite Japan’s hideous development and use of biological weapons against the Chinese in the 1930’s. Following the war, Von Neumann and particularly Teller continued to be involved in further developments now driven by anti-Communism sentiments. 

The route to the doomsday weapon started with the discovery of radioactivity towards the end of the 19th century, and in particular the discovery of radium by Pierre and Marie Curie at the turn of the century. Around 1902 Frederick Soddy and Sir William Crookes both highlighted the huge amounts of energy was bound up in matter. Crookes saying: “one gram could raise the entire fleet of the British Navy several thousand fleet in the sky”. By 1913 H.G. Wells had very explicitly written about a nuclear weapon in “A World Set Free”. The use of chemical weapons, tanks and aeroplanes in war had all been imagined well before they were used too. Clearly there are big technical issues to address in going from a science fiction idea to a real system in battle, but the point here is that these ideas had serious public currency well before they were realised: there could be no “we’ll keep this quiet and no-one will think of it”. In a sense the key theme of the book is the interweaving of fiction with fact through the first half of the 20th century.

It was during the First World War that “scientific” superweapons started to be used, and the importance of science in waging war started to be recognised explicitly. Fritz Haber, a chemist, Nobel prize-winner for his commercial synthesis of ammonia, contemporary of Einstein, was instrumental in bringing chemical weapons to war, he was a German nationalist and felt the development of such weapons a duty to his country. He seemed quite enthusiastic about his work, writing:
“Chlorine: easy to liquefy, disastrous to the human organism, very cheap, mind you! Phosgene: ten times as strong as chlorine. Mustard gas: the best fighting gas of all”.
Once the Germans had used chemical weapons the British and French quickly developed their own. Research and manufacture of chemical weapons was to involve up to 75,000 people by the end of the war – this is about half the number involved in the Manhattan Project. A minority of scientists considered chemical warfare as a blessing compared to the conventional equivalent, for many others it was utterly abhorrent. The military had mixed feelings. Chemical weapons were banned by a variety of treaties, practically they seemed something of a double-edged sword with the first British use of chlorine at Loos causing 2000 casualties on their own side which perhaps explains why they’ve been so rarely used since. With the rise of Nazism Haber, a Jew, was to flee Germany and die shortly thereafter.

The First World War also saw the foundation of the British Board of Invention and Research in 1916, tasked with finding science to fight wars – it sought ideas from the public, one of the which was to train cormorants to peck out the mortar between bricks!

Biological weapons were to be developed by the Japanese whilst at war in China during the 1930’s and the Second World War, in an effort led by Shiro Ishii. During this period thousands were to die through his work, many in a range of human experiments to match those carried out by the Nazi doctors. Following the Second World War Ishii was given immunity from prosecution in order that the US could obtain information on biological weapons from him.

So chemistry and biology produced rather unpleasant weapons but they could not be described as decisive: for that you need physicists.

Szilard was first to realise (in 1933) that an atomic bomb might be made via a chain reaction: the fission of an atomic nucleus producing two or more neutrons which would drive further fission. He made some effort to keep the idea secret, at least from the Germans, via a patent held by the British Admirality. This was a very unusual move for a scientist in an area of pure science. In 1939 he was to visit Roosevelt with Einstein to warn him of the potential for an atomic bomb and the possibility that the Germans would make one. Ultimately this contact led to the Manhattan Project and the bombs dropped on Hiroshima and Nagasaki: killing at least 200,000 people.

One of the recurring themes in fiction was the idea of a scientist discovering the doomsday weapon and then holding the world to ransom for peace with the new “system of the world”: a world government led by scientists and technocrats. This sort of idea is better described as left-wing rather than right-wing. And I can say, as a scientist, that it has a certain appeal! Perhaps this explains something of why scientists are more often perceived as left-wing rather than right-wing.

Doomsday Men ends with the story of Stanley Kubrick’s 1964 film “Dr Strangelove: or How I stopped worrying and learned to love the Bomb”. The title character appears to have been based on a combination of Teller, von Neumann and perhaps Werner von Braun – the German rocket scientist captured by the Americans who went on to found the US space programme.

Overall a rather good read: providing good context to the Manhattan Project and the Cold War, and the importance of science fiction in seeing into the future.

Footnote: one of the drawbacks of reading on a Kindle: I reached the end rather unexpectedly since the footnotes, bibliography, and index take up a third of the book!

Monday, February 14, 2011

Book Review: For all the tea in China

ForAllTeaChinaBookI’ve been on a bit of a reading spree: next up is “For all the tea in China” by Sarah Rose. This is the story of Robert Fortune and his trips to China in the mid-nineteenth century to obtain tea plants and the secret of tea manufacture for the East India Company to use in India.

Robert Fortune (1812-1880) was a botanist with a modest background. Starting his working life at the Royal Botanic Garden Edinburgh, he later became Curator of the Chelsea Physic Garden. These were relatively poorly paid posts, however there were few such positions to support a professional botanist without their own means of support. He made several substantial visits to the Far East, funded by the Horticultural Society of London and the British East India Company. He died a wealthy man in large part through the wide range of plant introductions he had made, as well as through sales of artefacts he had acquired in the Far East. The list of introductions is well worth a skim through for the modern gardener:

The East India Company had been given a monopoly of trade to the Far East in 1600, through this monopoly they had built a lucrative trade in silk and tea from China, as well as effectively running India. The trades from China were matched with trades into China of opium from India, by the middle of the 19th century addiction to opium was a significant problem in China. The volume of trade it brought made the East India Company a very significant contributor to British government income (of order 10%). Although there are now many global corporations, the East India Company was one of the first and in many ways most powerful. The company was ultimately to lose its dominance following the Indian Mutiny in 1858, and was finally wound up in 1874. The mutiny was likely the cumulation of a long process since the monopoly that the East India Company enjoyed was not popular with free-marketeers who were starting to come to the fore.

At the time of Fortune's first trip to China in 1845 the English had long been drinking tea imported from China, in exchange for opium grown in India. The English drank both green and black teas, although unlike the Chinese they added milk and sugar (obtained from another British colonial outpost). The Chinese were keen to keep the secret of both the tea plant, and its manufacture into tea leaves for making tea. Whilst the British, in particular the East India Company were keen to get these secrets believing (correctly) that tea would grow well in Himalayan India and would make a good profit. Some tea was already being grown in the Assam district of India but is was derived from inferior Chinese plants. The tea plant is Camellia sinensis a close relative of the decorative camellias of which Fortune also introduced some species.

Before Fortune's first visit to China it had not even been established that black tea and green tea came from the same plant, but were processed differently. His trips required considerable subterfuge: Westerners had only recently been allowed into anywhere other than a limited number of ports in China, as a result of the first Opium War and Fortune's activities went considerably beyond what was allowed even under these revised regulations. One of Fortune's discoveries was that green tea had been coloured by the Chinese for the export market using Prussian Blue (which is toxic) and gypsum. Following a couple of false starts he was eventually able to transport a large number of highest quality tea plant seedlings to Darjeeling in India, as well as providing skilled tea makers and extensive notes on the tea making process.

The key to Fortune's success in shipping out tea plants from China were Wardian cases, these are essentially sealed glass environments containing soil and some water. Plants, or more importantly, troublesome seeds could be sealed into these containers and as long as they remained sealed, and given some light there would be a good chance of their biological cargo surviving a lengthy sea journey through a range of climates. Prior to this discovery long distance transplantations were tricky. Nowadays we see Kew Gardens as largely a place of leisure, but in the 19th century it was very much at the heart of the Empire in terms of facilitating the movement of plants around the world for commercial reasons. This type of activity was also an early interest of the Royal Society.

It's difficult not to draw parallels between the state sanctioned opium trade which the United Kingdom used to support, and its current attitude to drug smuggling. Nor between the industrial espionage of the East India Company in the 19th century, and the current issues with the Chinese approach to intellectual property.

I found the sections of the book reporting Fortune's travels a bit unfulfilling: they seemed to be a sequence of travel anecdotes involving the mischief caused by his Chinese servants - this style does affect other parts of the books. However, more generally the book made me curious to know more about the East India Company, the Opium Wars and so forth and I felt I'd learnt something about the introduction of tea to India.

I'm tempted by Fortune's book: Three years' wanderings in the Northern Provinces of China 

Thursday, December 30, 2010

Book review: Mutants

Mutants Armand Marie LeroiChristmas is a time for reading, so in addition to Rolt’s Brunel biography I have also read “Mutants: On the form, varieties & errors of the human body” by Armand Marie Leroi.

This is a story of developmental biology told through the medium of mutants, people for whom development doesn’t go quite to standard plan.

The book runs through a sequence of distinct mutations: Siamese twinning, deformities to arms and legs, skeletal defects, dwarfs and giants, various sexual variations, albinism and hairiness, and finally ageing. His approach does not revel in the freak show aspects of human mutants rather makes a brief reference to the historical recognition of such mutations and uses this as a jumping off point for discussion of modern biological understanding.

Mutations have long been an area for scientific study because it was realised that studying malfunction would provide clues to the mechanisms of normal development.

The marvel of developmental biology is that it is a method of construction completely at odds to the human way of making complex devices. Rather than a complex entity assembling pieces to a plan, biology starts with an instruction set which builds order out of chaos with no external help. It is self-organisation, creation from (nearly) nothing with no supporting infrastructure. There are non-biological self-organising systems and we make use of some of them industrially, but there is nothing that matches the complexity, the heterogeneity that biology can achieve.

The fundamentals of development biology are genes coding for proteins that tell you where you are in the developing embryo and trigger growth or differentiation on that basis i.e. “I find myself in the presence of proteins A, B, and C at these particular concentrations, therefore I must make a leg”. As an example, the proteins noggin and bone morphogenetic protein 4 (BMP4) define the top and bottom of the growing embryo – in simple terms noggin stimulates the growth of the brain. Whimsical naming of a protein may seem like a good idea in the lab but I imagine it makes discussions with parents about the problems of their perhaps-dead child difficult.

An intriguing point is the frequent robustness of developmental mechanisms, often as not molecular biologists have identified a “critical” protein, created a “knock-out” mouse lacking that protein and discovered that the mouse developed relatively well – other developmental systems having compensated for the loss.

The diverse effects of mutations can be surprising, for example there is a condition called Kartagener’s Syndrome whereby the internal organs of the body are flipped left-right – the heart, rather than lying slightly on the left of the body lies on the right and so forth. People with this syndrome have respiratory problems, a diminished sense of smell and sterility. The cause of these apparently disparate problems is a faulty cilia motor, cilia are small hairs on the surface of a cell that move. In the lungs and nose they whip about to move mucus around, in men the cilia motor drives the tail of sperm, and in the developing embryo the whipping of cilia break the left-right symmetry. Hence failure of the cilia motor proteins leads to a diverse set of impacts.

In addition to proteins which induce specific behaviours, there are proteins which have a more overarching impacts, such as those produced in the pituitary gland, malfunctions of which can lead to dwarfism or gigantism.  

As usual my butterfly mind has fixed on some less relevant portions of the book. Plato giving voice to Aristophanes in The Symposium posited that sexual desire can be explained because man and woman were once combined: in fact three pairings existed man-man, man-woman and woman-woman. These creatures were physically joined, having four arms and legs, two heads and two “privy members”. However, they were troublesome (cartwheeling on their eight limbs is explicitly mentioned) – so Zeus separated them into the men and women. And now everyone seeks to find their original partner thus explaining homo- and hetero-sexuality. There’s some suggestion that Plato was making a little fun of Greek myth here!

Thanks to this book I have learned that the male scrotum is the homologous structure to the female labia, the two halves have fused to form a handy sack. The development of sexual organs finds the male really as something that has failed to become female.

Leroi finishes with signposts to a couple of open areas in developmental biology, one is race: people have a moderate ability to identify racial groups and tie them to countries but current genetics cannot match this ability often finding much bigger variations within populations. As Leroi highlights, this is a fraught area in social terms but it is interesting that differences obvious to people are not obvious to genetics. Secondly he mentions beauty: does beauty tell us something about genetic fitness?

This book highlights the huge gap between knowing the base pair sequence of DNA and understanding how the organisms arise from that sequence. At times the language gets technical a little too quickly and it could really have done with some explanatory diagrams.

Monday, November 29, 2010

Book review: Trilobites!

Triarthus_lateral
Triarthrus eatoni from Beechers Trilobite bed
This week I’m reporting on “Trilobite! Eye witness to evolution” by Richard Fortey, which I came to via Attenborough's “First Life” TV programme and advice from @crafthole. As usual this is intended as part notes for my own edification and part review. I read the Kindle version of this book, I’d recommend getting the paper version since the publishers have made no effort to incorporate any of the illustrations from the book into the electronic edition.

Fortey has a rather literary style which makes for rather pleasing reading: the book starts with a walk along the cliffs beyond Boscastle to a location used by Thomas Hardy in “A pair of blue eyes” where the hero comes face to face with a trilobite embedded in the cliffs. The book covers the discovery of trilobite anatomy; evolution, the drifting continents and what makes a palaeontologist tick.

Trilobites were common in the relatively early history of life on earth, during the Cambrian period, about 500 million years ago and became extinct at the end of the Permian period about 250 million years ago. The book starts with a description of trilobite anatomy - you can see the details on the wikipedia page. The basic fossil remnants are the hard shell of the trilobite, the upper surface shield - the closest living relatives to trilobites are things like woodlice and the horseshoe crab (which Fortey eats in Thailand!). Generally legs and soft parts do not fossilise, so it was some time before these structures were understood.

The first written record of a trilobite was by Dr Lhwyd in a letter to Martin Lister, reported to the Royal Society in 1699. It is a fleeting mention, and he mis-identifies his find as a "skeleton of some flat fish", noting that they are abundant but his illustration is quite clearly of a trilobite. Dr Lhwyd writes from Wales and much of the early history of the trilobite's discovery is tied up with Wales, trilobites are characteristic of the Cambrian period, named after Wales.

The image at the top of this post illustrates the discovery of trilobite legs. Most trilobites lost their legs in the fossilisation process, they are flimsy and poorly armoured. However in the case of the Beechers' trilobite bed special preservation circumstances have fossilised the legs, in this case picked out in 'fools gold' or iron pyrite.

I was rather impressed by the chapter on trilobite eyes, as reported in my post on First Life, trilobite eyes are made from calcite - an array of calcite hexagonal prisms in the eye channels light to light receptors. Calcite is birefringent, one of the features of this property is that light only travels along the prisms to the light sensors if it enters them square on. So the relatively large number of calcite prisms in trilobite eyes suggest resolution comes from directional selectivity of the prisms. Some trilobite eyes are more complex than this: the Phacops eye is comprised of fewer prisms but with cunning lenses at the outside faces which work using magnesium concentration gradients to eliminate chromatic aberration - this suggests they channel light to multiple light receptors. Calcite is calcium carbonate, but the calcium can be selectively replaced by magnesium which changes it's optical properties - in terms of man-made optics this type of thing is feasible but it's pretty sophisticated. Reading this on the train the temptation to grab fellow commuters and jab my finger at the appropriate paragraph shouting "Have you read this about trilobite eyes, it is flippin' incredible!!" was almost overwhelming!

Fortey is clearly passionate about his topic, as he says of breaking rocks to find the trilobites therein:
"Hardened criminals used to be required to do the same thing before it was banned as inhumane. I loved it."
He works as a palaeontologists tasked with identifying trilobites, and if necessary creating new species. I learnt that the Linnean binomial system is slightly more complex than I thought, as well as having a two part name each species is tagged with the name of the person who first described a species this helps the expert in the field trace the original citation for a species. You gain the impression of someone able to identify one trilobite of a myriad potential species from mere fragments, in the manner of those archaeologists who can apparently build a pot, complete with its history, from a tiny shard. As arthropods with tough exoskeletons, trilobites moulted their shells to grow - each animal strewing the landscape with potential fossil fragments: fossil factories, Fortey calls them. He goes into some detail of the inferred life styles of trilobites and their development i.e how juveniles grow into adults. For some of the developmental stuff it would be nice to see the supporting fossils: it sounds ferociously difficult separating juvenile forms from different species of trilobite.

The large variety of trilobites, and their appearance in the early days of fossilising life, makes them a useful tool in the study of how evolution operates. Fortey rebuts the proposal by Stephen Jay Gould in "Wonderful Life" for a Cambrian explosion producing massive diversity of forms, beyond what we see now. Arguing from research by former colleagues that the variation in forms discovered in the Burgess Shale is much smaller than Gould claims. The difference being in the interpretation of how diverse forms are from relatively indistinct fossils. This is perhaps a warning to the casual reader that controversies are easily hidden in the popular science literature.

A second application of trilobites is in the dating of rocks: they are very common, fossilise well and, over a period of time, evolved into many distinctive forms which makes them ideal for the purpose. Finally they can also be used in the reconstruction of ancient continents: identifying common collections of trilobites in disparate parts of the world suggests they were originally found in one place.

As mentioned at the top of page, my Kindle edition of this book was bereft of illustrations but by the power of google, I can give you phacops, famous for it's fancy eyes, ollenelus - one of the commonest of the early trilobites, calymene blumenbachii pleasingly convex as Fortey says, paradoxides another early species, Ogygiocarella debuchii as discovered by Dr Lhywd.

I found this book most useful as an insight into the mind of a palaeontologist and a taxonomist.

Further reading
An overview of trilobites
A piece by Fortey in American Scientist on trilobites (pdf)

Tuesday, November 16, 2010

First Life

Charnia, Image by Leicester Museum
The latest, and perhaps last, David Attenborough TV series is the two episode First Life: about the very earliest life on earth. It ends as the first life emerges from the sea.

David Attenborough is a hero in our household: Mrs SomeBeans and I saw his "Life on Earth" series at an impressionable age; he is our matchmaker, were it not for "Life on Earth" Mrs SomeBeans would not have gone to university to study zoology, which is where she met me - at university, not as a zoology specimen, I hasten to add! The good thing about a David Attenborough nature programme, is that they are rich enough that even someone who had done a degree in zoology will actually learn quite a lot of stuff. Attenborough's autobiography, Life on Air , is also well worth a read - perhaps the most striking thing is the realisation that someone still alive was involved in creating the TV documentary format.

Returning to "First Life": the programme starts with Charnia  a fossil identified in Charnwood Forest - close to where Attenborough grew up, it was the first fossil found in Precambrian rocks, dating to at least 580million years ago, which had previously been thought devoid of life. As a time yardstick: the earth is about 4billion years old and the dinosaurs flourished between 230million and 65 million years ago. Charnia looks like a simple frond, it lived in the sea. It is distinct from the later fossils found in the Precambrian and has no modern relatives - in this sense it was a dead-end for life.

Following the Charnwood Forest fossils (examples of which are found around the world) the program turns to two further earlier fossil collections at Mistaken Point in Canada and in the Ediacara Hills in Australia. These data from a slightly later period. The Ediacara fossils were the first such collection of fossils found, whilst those at Mistaken Point are the most diverse. As fossils they are fairly subtle marks in the rocks, the creatures from which they derived were soft-bodied - it's surprising the range of conclusions the experts come to on such markings: inferring early reproduction and feeding strategies.

The second episode focussed largely on the fossils found in the Burgess Shale, in the Canadian Rockies, I've written about them previously. The key point is that the Burgess Shale assemblage dating to about 500million years ago, exhibits an enormous range of forms - more diverse than seen now, many of which have subsequently become extinct. The fossilisation conditions of the Burgess Shale mean that the soft parts, rather than just the hard parts of the animals are preserved. Seeing them on film there are several striking things: the Burgess Shale quarry is tiny, perched half way up a steep scree slope and the fossils are smaller than I had thought most only two or three centimetres long and very subtle - thin film like fossils only visible in the rock from certain angles.

In contrast the fossil trilobites from the Atlas Mountains in Morocco were outright awesome (not a word I use often or lightly). They're beautifully detailed, and in full 3D including all manner of weird, delicate bristles and appendages Stacks of pictures of the trilobites can be found using the appropriate Google Search. That looks a bit of a dry description, they really are flippin' fantastic fossils. I'd never realised such fossils existed! The fossil below is from a species which became extinct 400 million years ago - the trilobites became extinct 250 million years ago.

Trilobite: Walliserops Trifurcatus (Image from FossilMall)
Apparently the eyes of the trilobite are made from calcite lenses - unlike any modern animal. This is interesting because calcite is birefringent so the eyes could potentially have given trilobites polarisation sensitive vision. It implies a high degree of control of the crystallisation of the mineral. Along with the trilobites, sizeable sea scorpions (eurypterid) were found - some up to 2.5metres in length (see here) - this is 1950's b-movie sized arthropod!

First Life is a nice little series about something deeply interesting: how the very first life looked and is nicely executed with location work, expert contributions from real experts and computer graphics visualisations of the living creatures derived from the often badly squashed and indistinct fossils. I wish it had been longer! Thanks to a fellow tweep I have put Richard Fortey's "Trilobite: Eye Witness to Evolution" on my reading list.

Wednesday, November 03, 2010

Book review: The Scientific Revolution and the Origins of Modern Science

ScientificRevolution_JohnHenryThe book I review in this post is “The Scientific Revolution and the Origins of Modern Science” by John Henry. In contrast to previous history books I have read this is neither popular history of science, nor original material but instead an academic text book. My first impressions are that it is a slim volume (100 pages) and contains no pictures! Since childhood I have tended towards the weightier volume, feeling it better value for money.

The Scientific Revolution is a period in European history during which the way in which science was done changed dramatically. The main action took place during the 17th century with lesser changes occurring in the 15th and 18th centuries. The Royal Society, on which I have blogged several times, plays a part in this Revolution and God’s Philosophers by James Hannam is one view of the preamble to the period.

The book starts with a brief introduction to historiography (methods of history research) of the Scientific Revolution, with a particular warning against “whiggish” behaviour: that’s to say looking back into the past and extracting from it that thread that leads to the future, ignoring all other things - the preferred alternative being to look at a period as a whole in its own terms. History as introduced by scientists is often highly whiggish.

Next up is a highlighting of the Renaissance, a period immediately prior to the Scientific Revolution wherein much renewed effort was made to learn from the Classics, the importance of the Renaissance appears to have been in initiating a break from the natural philosophy and theology taught in the universities of the time, which were teaching rather than research institutions.

The Scientific Revolution introduced two “methods of science” which differentiated it from the previous studies of natural philosophy: mathematisation and experiment. Mathematisation in that for sciences particularly relating to physics the aim became to develop a mathematical model for the physical behaviour observed. Prior to the Revolution mathematics was seen almost as a menial craft, inferior to both natural philosophy and theology which relied on logical chains of deduction to establish causes. These days mathematics has a far higher prestige, as illustrated in this xkcd comicstrip. The second element of experimentation means the use of controlled experimentation rather than pure thought to determine true facts.

One of the more surprising insights for me was the influence of magic on the developing science, very much in parallel to the influence of alchemy on the developing chemical sciences: magic was a physical equivalent. Magicians were intensely interested in the mysterious properties of physical objects and were early users of lenses and mirrors. The experience they developed in manipulating physical objects was the equivalent of the experience the alchemists gained in manipulating chemicals. Some of this thinking went forward into the new science the remaining rump of bonkers stuff left behind.

It’s very easy to glibly teach of forces and atoms to students, or perhaps blithely demonstrate the solution to an, on the face of it, tricky integral. However, we take a lot for granted: the great names of the past were at least as intelligent as more recent ones such as Einstein or Maxwell yet they struggled greatly with the idea of a force acting at a distance and so forth and that’s because these ideas are actually not obvious except in retrospect. Mechanical philosophies of Descartes and Hobbes were amongst the competing ideas for a “system of the world” ultimately supplanted by Newton.

Henry highlights that most of the participants in the Scientific Revolution were religiously devout, as were many in that time. An interesting idea taken up, but now apparently rejected, was that Puritanism was essential in driving the Scientific Revolution in Britain. Despite this, it was in this period that atheism started to appear.

A few times Henry refers to differences in emphasis between the developing new science in Britain when compared to the Continent. In Britain the emphasis was on an almost legalistic approach with purportedly bare facts presented to a jury in the form, for example, of the fellows of the Royal Society – theorising was in principle depreciated. This approach originates with Francis Bacon, a former Attorney General and experienced legal figure. On the Continent the emphasis was different, experiments were seen more as a demonstration of the correctness of a theory. The reason for this difference is laid at the door of the English Civil War, only briefly passed when the Royal Society was founded. It is argued that this largely non-confrontational style arose from a need for a bit of peace following the recent turmoil.

In sum I found this book an interesting experience: it’s very dense and heavily referenced. Popular history of science tends to revolve around individual biography and it’s nice to get some context for these lives. I’m particularly interested in following up some of the references to other European learned societies.

Further Reading

The book provides a list of handy links to online resources:

  1. Stanford Encyclopaedia of Philosophy
  2. Prof. Robert A. Hatch’s Scientific Revolution Website
  3. Prof. Paul Halsall’s Scientific Revolution Website
  4. SparkNotes Study Guide on the Scientific Revolution
  5. The Robert Boyle Project
  6. The Galileo Project
  7. The Newton Project
  8. The MacTutor History of Mathematics Archive

These all look interesting, and although not polished I’ve been using the MacTutor for many years.

Monday, October 25, 2010

Fun with fluids!

ring4aBack to some science stuff again, I’ve been meaning to do a blog post on smoke rings for a while, thinking that a simple description of what’s going on would be rather nice. The image to the right is of a “steam” ring blown by Mount Etna.

The explanation of smoke rings goes into the field of “fluid dynamics”; to a physicist a fluid is a liquid or a gas – some of the examples linked to here are of gas-in-gas rings (like the smoke ring), some are liquid-in-liquid rings and some are gas-in-liquid rings (bubble rings), the underlying physics is always the same.

A smoke ring is an example of a more general phenomena called a “vortex ring”. Scientists aren’t the only ones interested in fluid dynamics: this is a video of a dolphin playing with bubble ring. My fluid dynamics textbook helpfully points out that the velocity field around a vortex ring is equivalent mathematically to the magnetic field lines around a loop of current carrying wire. For a physicist this is a useful statement because it means you can carry across your understanding in one area to another – for non-physicists less so.

A vortex ring is made by pushing a pulse of fluid through a hole, friction slows down the fluid close to the edges of the hole whilst the fluid in the centre of the hole continues to move more quickly. On leaving the hole, fluid at the edges is rotating around the perimeter of the ring. Push the air to fast and the vortex ring won’t form, it’ll be destroyed by turbulence. You can see how this works in the image below (or, perhaps better, this video). The smoke in a smoke ring is only there to highlight what the air is up to – in liquids dyes can be used to reveal the patterns of liquid flow, or small particles. In the laboratory, small particles suspended in liquid can be illuminated by sheets of laser light to provide cross-sections through the flow patterns.

image003

The first surprising thing about smoke rings is their persistence – for a gassy disturbance they maintain their shape for a remarkably long time. The smoke is actually trapped inside the vortex, and can only diffuse away slowly. By their very nature vortex rings are obliged to travel along in the direction of their axis, as the core of the vortex ring gets larger the forward motion of the ring slows.

Beyond simple vortex rings: we can also see vortex rings colliding and breaking up into rings of rings, and vortex rings overtaking – a faster vortex ring forces a slower one to expand whilst it passes through. These behaviours are all understandable using fluid dynamics, and can be simulated in a computer.

Vortices can also be found in lines, a vortex ring is simply a vortex line with the two loose ends tied together. Tornados and the whirlpool of water going down the plughole in the bath are examples of vortex lines.

Vortex rings are simply one facet of fluid behaviour arising from “vorticity”, that’s to say the behaviour of spinning packets of fluid. The “packets” being a handy conceptual device of breaking up a body of fluid into little pieces for further consideration. From a historical point of view, vortex lines were first understood by Helmholtz (1858), with some details added later by Kelvin (1867). What’s interesting about the Kelvin paper is that it was written at a time when the existence and understanding of atoms was in it’s infancy and there was some thought that atoms may be made from vortex rings (this turns out not to be true).

More generally fluids are understood using the Navier-Stokes equations which are a combination of Newton’s laws for fluids (forces make things move), viscosity (friction for liquids) and pressure. Beyond this the effects of surface tension, chemical reactions and magnet and electric fields to introduce ever more complexity. Even with the equations in hand, there is a large difficulty in solving them to produce useful results – just how fast can I pump liquid through this complicated shape?

Research into fluid dynamics is important for practical reasons (like making aeroplanes fly, simulating the weather and understanding how liquids move through all manner of mechanical devices from aerosol sprays to hydroelectric power plants) but it’s also just plain fun.

These videos of vortex rings are well worth a look:

  1. Dolphins playing with vortex rings
  2. Vortex ring collision
  3. Vortex ring, overtaking manoeuvre
  4. Computer simulation of a vortex ring

There’s many more like this, try searching You Tube for “vortex rings”.

Thursday, October 14, 2010

Book review: God’s Philosophers

God_the_Geometer I seem to be on a run of book reviewing at the moment, as I’ve indicated before these are as much for me as they are for you! This weeks contribution is on “God’s Philosophers: How the Medieval World laid the foundations of Modern Science“ by James Hannam. This book looks at the development of science, or at least a precursor to modern science, during the Middle Ages (5th-15th century). This fits in with my previous book reviewing which has gone back to the founding of the Royal Society (1662), and a little earlier with Gerard Mercator (1512-1594).

To my mind the book makes a poor start in the introduction by telling me how everything I believe about the Middle (or Dark) Ages is wrong, and so is everyone else. I’m prepared to accept that my visualisation of the Dark Ages, as being quite literally Dark with peasants fumbling around in a permanent twilight may be wrong, however this type of introduction generally leaves me believing that the writer is a conspiracy theorist!

A recurring theme of the book is how those studying natural philosophy (a convenient term for the proto-science) continually ran the risk of being accused of heresy. Hannam seems to portray the treatment of heresy as not really so bad: only 1 in 20 trials resulted in burning at the stake, there wasn’t much torture, the victim was asking for it, the church handed over the heretics to the secular authorities who carried out the most terrible punishment. This seems to treat lightly the death, by burning at the stake, of people who simply believed something different. Perhaps more insidiously anyone studying natural philosophy had to have an eye to what the church believed in case what they studied was considered to be heretical. Later Hannam’s defence turns out to be more narrowly defined: he sees himself as defending the Catholic Church against Protestants. He reserves a special ire for humanists, those in the Renaissance who had a particular fondness for studying the ancient classics.

This said, the book is a nice overview of the development of the academic life after the fall of the Roman Empire, with the early universities in Italy and France growing up as offshoots from the great cathedrals. The very earliest of these institutions taught law, and sometime later medicine although the core of early teaching was in theology. A great deal of effort was expended in recovering the work of the Ancients (Greek philosophers) this was made difficult by the absence of much knowledge of Greek in Western Europe. The Arabs had picked up much of this material in an earlier period but translated it into Arabic rather than Greek whilst Western Europe had Latin as a common scholarly language. Interest was primarily in Aristotle, although later the works of Plato were re-discovered. In some ways it’s this aspect of the Middle Age and Renaissance enterprise which is so confusing to a modern scientist. It just looks like it would be far easier, and quicker, to make a fresh start and discover things for yourself rather than dredge through ancient, partial manuscripts in ill-known languages for clues.

There are various places in the book where I can feel myself trying to shout back through the ages “Yes, yes, you’re on the right track, keep going!”. Only to see the protagonist draw back at the last minute or for their work to be subsequently ignored. Examples include Nicole Oresme (1323-1382) and his use of graphs in understanding physical ideas. Or the theory of impetus developed by Jean Buridan (~1300-1358), which is a very direct precursor of modern theories of mechanical motion. Similarly isolated sparks spoke of doing controlled experiments to test theories, and the idea that mathematics could be used to describe physical processes. However these ideas did not seem to start drawing together until the period in which Galileo lived (1564-1642).

The part that astrology played in the development of astronomy is rather illuminating, as part of their programme the astrologers wanted to known exactly where heavenly bodies would be at some point in time in the past or future therefore they expended considerable, skilled effort in measuring the locations of these bodies and building models from these measurements. This was the work that lead Copernicus to propose a heliocentric solar system, and would have fed into Newton’s work on gravity, and all done for completely ridiculous reasons. This also highlights some of the oddities in the thinking of the early pioneers of the modern period, for example William Gilbert, who did excellent work on magnetism did it in a distinctly odd framework – he believed the magnet was the soul of a planet, similarly William Harvey’s work on the circulation of blood and Isaac Newton’s obsessive alchemy and bible study.

During the Middle Ages there were various technological developments: the mechanical clock (Norwich, 1273), spectacles (Venice, 1300), modern printing (by Gutenberg around 1439). Paper making had been brought to Europe at some time before 1276 when the first paper mill is recorded in central Italy. Gunpowder was first mentioned in Europe by Roger Bacon (1267), having been invented in China in around the 9th century. These inventions largely arose outside of the university system.

The book ends with the death of Galileo in 1642, who had been subjected to a trial for heresy following which he was held under house arrest for the remainder of his life. The book makes clear, that in common with Newton, Galileo was “standing on the shoulders of giants” drawing heavily on work in the Middle Ages – although synthesising into a coherent whole, making his own additions and also covering a large range of topics over his lifetime.

Finally there is a timeline, a cast of characters and a nice, manageable set of further readings.

I feel ambivalent about this book, the historical aspects of it I found very interesting, the proselytising less so. It seems evident that there was progress in proto-science during the Middle Ages, and also in technology. Hannam claims that the Catholic Church facilitated this progress; the evidence he presents is mixed – they supported scholarship and the founding of universities but simultaneously ran a system of Inquisition to detect heresy which made free academic enquiry difficult.

Image: Frontspiece of Bible Moralisee, God the Geometer.

Monday, October 11, 2010

Early reports of the Royal Society

In an earlier post I wrote about Thomas Sprat’sHistory of the Royal Society of London, for the improving of Natural Knowledge“. Published in 1667, under the direction of the Royal Society which had first met in 1660, receiving their royal charter in 1662. In that post I deferred discussion of a selection of the early reports of the Society that were embedded in the History, for reasons of space.

The reports by title are these:

  • Answers returned by Sir Philberto Vernatti (Resident of Batavia in Java Major)
  • A Method for making a History of the Weather by Mr Hook
  • Directions for the Observations of the Eclipses of the Moon by Mr Rooke
  • A Proposal for Making Wine by Dr. Goddard
  • A Relation of the Pico Teneriffe
  • Experiments of the Weight of Bodies increased in the Fire by Lord Brouncker
  • Experiments of a Stone called Oculus Mundi by Dr Goddard
  • An account of a Dog dissected by Mr Hook
  • Experiments of the Recoiling of Guns by Lord Brouncker
  • The History of the Making of Salt-Peter and The History of Making Gunpowder by Mr Henshaw
  • An Apparatus to the History of the Common Practices of Dy[e]ing by Sir William Petty
  • The History of the Generation and ordering of Green Oysters Commonly called Colchester-Oysters

Interspersed amongst them Sprat adds in various brief comments on other work of the Society along with what amounts to a personal eulogy to Christopher Wren, who seems to have been involved in pretty much everything although Sprat seems to have been generous in attributing to Wren work which was largely done by other people.

Looking first at the authors: of Sir Philberto Vernatti I can find little, he appears to have been Governor of Batavia (now Jakarta) for the Dutch East India Company whilst most references I’ve found to him arise from this report to the Royal Society; Mr Hook was the first curator of experiments for the Royal Society and paid an important role in keeping the Society with interesting things to see, he was an outstanding scientist in his own right; Lord Brouncker was the first President of the Royal Society; Mr Rooke appears to have been Lawrence Rooke, who died in 1662; Dr Goddard is Dr Jonathan Goddard the early Society met in his lodgings at Gresham College, physician to Charles I and present at the death of Cromwell; Mr Henshaw is Thomas Henshaw an early Biological Sciences Secretary to the Royal Society; Sir William Petty was amongst other things an economist and a Parliamentarian in the Civil War. On the whole these reports look like they have been selected on political grounds, they are from the movers and shakers of the Society.

The contributions vary considerably in length and content, Dr Goddard’s proposal on making wine amounts to: “Do it in the West Indies using sugar cane”, similarly Mr Hooks account of dissecting a dog is very brief (it’s also pretty horrifying).

The reports on dyeing, oysters and the making of Salt-peter and gunpowder are quite detailed reviews of the current “state-of-the-art” in important trades, involving both references to previous literature and reports of current practice which read very much as if the authors had gone and observed the processes described. The answers returned by men in distant places: Sir Philoberto Vernatti in Batavia, Java and the report on the scaling of Pico Teneriffe are also very much directed to trade: does this wood grow well there? These are quite lengthy and range over quite a range of topics. From this it’s clear that the Royal Society wanted to be seen as contributing to the national wealth.

The reports by Hooke (on recording the weather), Rooke, Brouncker and Goddard (on Oculus mundi) are those which most closely resemble modern scientific papers. They report methods for conducting measurements, or the results of those measurements, unlike modern papers they do not draw strong conclusions from those measurements. In a sense they are following the scheme laid out by Sprat in which empirical measurement is important and theorising comes later. Oculus Mundi is a form of opal now known as hydrophane which goes transparent when it absorbs water, the OED reports that Sir Kenelme Digby had brought some of this material to the Society in 1661.

In sum it looks like the early Society was very busy. Much of what they wrote was very practical and aside from a comment on making insects from cheese and sack it largely looks quite sensible. In these reports I can see the origins of the primary scientific literature that I access as part of my work.

Sunday, October 03, 2010

Book review: The History of the Royal Society of London by Thomas Sprat

NPG D11592, Thomas Sprat; Thomas Sprat In which I venture into original material, in the form of Thomas Sprat’sHistory of the Royal Society of London, for the improving of Natural Knowledge“. Published in 1667, under the direction of the Royal Society which had first met in 1660, receiving their royal charter in 1662. I must admit to having attempted to read this book a couple of times before and failed; the copy I have is a facsimile of the original therefore written in early modern English with heavy use of the “long s” inevitably leading to an internal voice with a pronounced lisp! It’s probably useful to replace “History” with “Prospectus” in the title, to satisfy modern tastes. Despite it’s age the writing style is surprisingly readable to my modern eyes.

Unlike any other book I have read the book starts with a dedication to the King, followed by a poem praising Francis Bacon (1561-1626). Bacon’s presence recurs throughout the book, Sprat clearly sees him as the intellectual godfather of the organisation. The book is divided into three sections; the first is a prehistory describing the state of natural knowledge before the Royal Society, the second section details the founding of the Society and the final section discusses the value of the knowledge the Society seeks.

The tour of prehistory is rapid; starting with the ancient priests who held knowledge to themselves, followed by the Greek philosophers (described as the Ancients) who Sprat feels were too fond of rhetoric in determining questions of knowledge and who he accuses of “hastiness”. The Romans receive relatively short shrift. Following the Roman Empire, Sprat sees the rise of the Church of Rome and a relatively barren period dominated by war, he cites here William of Malmsbury (1080-1143), an early English historian in support of this. He then bemoans the time spent by the Scholastics in what he considers pointless theology in the later period, presumably 1000-1500, William of Ockham falls into this group. Finally he comes to the recent era where he lists five groups involved in natural philosophising. Francis Bacon is cited reverentially once again, those taking on the philosophy of the ancients – tidying it up after it’s release from the abbeys in the Reformation, are less venerated. “Chymists” receive a mixed review with the more pedestrian welcomed but the alchemists, often seeking eternal life or some other fancy, are scorned. Isaac Newton, a later president of the Royal Society was a keen alchemist but by this time it was seen as not quite proper. He also comments on the coming of specialisation to different areas of science.

The founding fathers of the Royal Society started meeting in Doctor Wilkins lodgings in Wadham College, Oxford – it’s not stated explicitly when this started but it ended in around 1638 when the meetings moved to Gresham College in London. Sprat skims over the Civil War (1642-1651), although this period was clearly much on his mind in writing the book, then happily reports: “For the Royal Society had its beginning in the wonderful pacifick year of 1660”, the year of the Restoration when Charles II returned to the English throne. Sprat goes on to describe in some detail the guiding principles of the society, explicitly ruling out a teaching organisation citing the time required to do this and the potentially unhealthy Master-pupil relationship as damaging to the purposes of the Society. It is a principle of the new organisation that men of all religions and nations are welcome. This internationalism is a hallmark of modern science. Also highlighted is the idea that the Royal Society becomes a central repository for written information, the first of its kind. The Royal Society was funded from the subscriptions of it’s fellows, although they were open to public funding.

Sprat then provides a rather detailed description of how the Royal Society is constituted including how they go about their business in terms of doing and reporting experiments, I must admit to finding this a bit dull. It has the air of an organisational fanatic describing his perfect organisation, it’s questionable how closely the Royal Society managed to keep to this ideal. However, in his description of the processes of the Society we can see the genesis of the still used scientific literature, with the primary literature comprised of relatively short papers containing experimental results and theoretical developments based on those results. Charles II makes several appearances here, unsurprising given the recent granting of the Royal charter, but he also seems to have been moderately involved in the Society and had his own chemistry laboratory.

A substantial portion of the middle of the book is taken by a compilation of reports by the early Royal Society, these include:
  • Answers returned by Sir Philberto Vernatti (Resident of Batavia in Java Major)
  • A Method for making a History of the Weather by Mr Hook
  • Directions for the Observations of the Eclipses of the Moon by Mr Rooke
  • A Proposal for Making Wine by Dr. Goddard
  • A Relation of the Pico Teneriffe
  • Experiments of the Weight of Bodies increased in the Fire by Lord Brouncker
  • Experiments of a Stone called Oculus Mundi by Dr Goddard
  • An account of a Dog dissected by Mr Hook
  • Experiments of the Recoiling of Guns by Lord Brouncker
  • The History of the Making of Salt-Peter by Mr Henshaw
  • The History of Making Gunpowder
  • An Apparatus to the History of the Common Practices of Dy[e]ing by Sir William Petty
  • The History of the Generation and ordering of Green Oysters Commonly called Colchester-Oysters
I shall write on these reports in a separate post.
The book ends with a lengthy rebuttal of various criticisms of the Royal Society, including how “experimenting” is entirely compatible with the Christian religion and specifically the Church of England; this is perhaps unsurprising given Sprat’s occupation as a churchman. In addition to this there is the appeal that experimental philosophy as demonstrated by the Royal Society can benefit the nation by improving its industry and trade, including such things as importing plants across the emire. It also defends the interest of the nobility in this area, claiming that their country estates are the ideal places to conduct such studies, whilst the lower orders go off to fight wars!

Reading this book was an unusual experience for me. In contrast to the modern histories I more usually read I felt much more obliged to ask questions like: Why is this person writing this book? Why was Bacon so important? Is this some reverence to a politically important forbearer? Why the need for the book at all? A book length defence of such an organisation only 5 years after its formation seems a bit odd.

Reading this has given me a taste for contemporary material, I think I might have to look into Pepys and some original scientific publications.

Further Reading
  1. Google Books version of the History of the Royal Society of London, for the improving of Natural Knowledge.
  2. My earlier blog posts on the Royal Society
  3. Image from the National Portrait Gallery